1 #ifndef __VIENNA_RNA_PACKAGE_READ_EPARS_H__
2 #define __VIENNA_RNA_PACKAGE_READ_EPARS_H__
41 INT11, INT11_H, INT21, INT21_H, INT22, INT22_H,
46 MMI1N, MMI1N_H, MMI23, MMI23_H,
68 INT11_DNA, INT11_H_DNA, INT21_DNA, INT21_H_DNA, INT22_DNA, INT22_H_DNA,
73 MMI1N_DNA, MMI1N_H_DNA, MMI23_DNA, MMI23_H_DNA,
80 TRI_DNA, TL_DNA, HEX_DNA,
88 HP_HYBRID, HP_H_HYBRID,
90 IL_HYBRID, IL_H_HYBRID,
91 INT11_HYBRID, INT11_H_HYBRID, INT21_HYBRID, INT21_H_HYBRID, INT22_HYBRID, INT22_H_HYBRID,
94 MMH_HYBRID, MMH_H_HYBRID,
95 MMI_HYBRID, MMI_H_HYBRID,
96 MMI1N_HYBRID, MMI1N_H_HYBRID, MMI23_HYBRID, MMI23_H_HYBRID,
97 MMM_HYBRID, MMM_H_HYBRID,
98 MME_HYBRID, MME_H_HYBRID,
100 D5_HYBRID, D5_H_HYBRID,
101 D3_HYBRID, D3_H_HYBRID,
103 TRI_HYBRID, TL_HYBRID, HEX_HYBRID,
105 NIN_HYBRID, MISC_HYBRID,
111 #define VRNA_PARAMETER_FILE_RNA 1
112 #define VRNA_PARAMETER_FILE_DNA 2
113 #define VRNA_PARAMETER_FILE_HYBRID 4
130 void write_parameter_file_full(
const char fname[],
int options);
136 enum parset gettype(
const char *ident);
142 const char *settype(
enum parset s);
void read_parameter_file(const char fname[])
Read energy parameters from a file.
void write_parameter_file(const char fname[])
Write energy parameters to a file.
parset
Identifiers for energy contribution parameters in parameter files.
Definition: read_epars.h:22