RNAlib-2.2.0-RC2
Data Structures and Preprocessor Macros

All datastructures and typedefs shared among the Vienna RNA Package can be found here. More...

+ Collaboration diagram for Data Structures and Preprocessor Macros:

Modules

 Basic Data Structures for Structure Prediction and Evaluation
 This module provides interfaces that deal with the most basic data structures used in structure predicting and energy evaluating function of the RNAlib.
 

Data Structures

struct  plist
 this datastructure is used as input parameter in functions of PS_dot.h and others More...
 
struct  cpair
 this datastructure is used as input parameter in functions of PS_dot.c More...
 
struct  sect
 Stack of partial structures for backtracking. More...
 
struct  bondT
 Base pair. More...
 
struct  bondTEn
 Base pair with associated energy. More...
 
struct  PAIR
 Base pair data structure used in subopt.c. More...
 
struct  INTERVAL
 Sequence interval stack element used in subopt.c. More...
 
struct  SOLUTION
 Solution element from subopt.c. More...
 
struct  cofoldF
 
struct  ConcEnt
 
struct  pairpro
 
struct  pair_info
 A base pair info structure. More...
 
struct  move_t
 
struct  intermediate_t
 
struct  path_t
 
struct  pu_contrib
 contributions to p_u More...
 
struct  interact
 
struct  pu_out
 Collection of all free_energy of beeing unpaired values for output. More...
 
struct  constrain
 constraints for cofolding More...
 
struct  duplexT
 
struct  folden
 
struct  snoopT
 
struct  dupVar
 

Macros

#define MAXDOS   1000
 Maximum density of states discretization for subopt.
 

Detailed Description

All datastructures and typedefs shared among the Vienna RNA Package can be found here.