RNAlib-2.2.0-RC3
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Various functions for plotting RNA secondary structures, dot-plots and other visualizations. More...
Go to the source code of this file.
Functions | |
int | PS_rna_plot (char *string, char *structure, char *file) |
Produce a secondary structure graph in PostScript and write it to 'filename'. More... | |
int | PS_rna_plot_a (char *string, char *structure, char *file, char *pre, char *post) |
Produce a secondary structure graph in PostScript including additional annotation macros and write it to 'filename'. More... | |
int | gmlRNA (char *string, char *structure, char *ssfile, char option) |
Produce a secondary structure graph in Graph Meta Language (gml) and write it to a file. More... | |
int | ssv_rna_plot (char *string, char *structure, char *ssfile) |
Produce a secondary structure graph in SStructView format. More... | |
int | svg_rna_plot (char *string, char *structure, char *ssfile) |
Produce a secondary structure plot in SVG format and write it to a file. More... | |
int | xrna_plot (char *string, char *structure, char *ssfile) |
Produce a secondary structure plot for further editing in XRNA. More... | |
int | PS_dot_plot_list (char *seq, char *filename, plist *pl, plist *mf, char *comment) |
Produce a postscript dot-plot from two pair lists. More... | |
int | aliPS_color_aln (const char *structure, const char *filename, const char *seqs[], const char *names[]) |
int | PS_dot_plot (char *string, char *file) |
Produce postscript dot-plot. More... | |
Various functions for plotting RNA secondary structures, dot-plots and other visualizations.