1 #ifndef __VIENNA_RNA_PACKAGE_FOLD_VARS_H__
2 #define __VIENNA_RNA_PACKAGE_FOLD_VARS_H__
18 #define DEPRECATED(func) func __attribute__ ((deprecated))
20 #define DEPRECATED(func) func
76 extern FLT_OR_DBL *
pr;
88 char * option_string(
void);
int csv
generate comma seperated output
int cut_point
Marks the position (starting from 1) of the first nucleotide of the second molecule within the concat...
The model details data structure and its corresponding modifiers.
All datastructures and typedefs shared among the Vienna RNA Package can be found here.
bondT * base_pair
Contains a list of base pairs after a call to fold().
int fold_constrained
Global switch to activate/deactivate folding with structure constraints.
Base pair.
Definition: data_structures.h:122
FLT_OR_DBL * pr
A pointer to the base pair probability matrix.
int * iindx
index array to move through pr.