1 #ifndef __VIENNA_RNA_PACKAGE_PROFILEDIST_H__
2 #define __VIENNA_RNA_PACKAGE_PROFILEDIST_H__
5 #define DEPRECATED(func) func __attribute__ ((deprecated))
7 #define DEPRECATED(func) func
float profile_edit_distance(const float *T1, const float *T2)
Align the 2 probability profiles T1, T2 .
void free_profile(float *T)
free space allocated in Make_bp_profile
All datastructures and typedefs shared among the Vienna RNA Package can be found here.
float * Make_bp_profile_bppm(FLT_OR_DBL *bppm, int length)
condense pair probability matrix into a vector containing probabilities for unpaired, upstream paired and downstream paired.
float * Make_bp_profile(int length)
void print_bppm(const float *T)
print string representation of probability profile