1 #ifndef VIENNA_RNA_PACKAGE_FIND_PATH_H 2 #define VIENNA_RNA_PACKAGE_FIND_PATH_H 26 #ifndef VRNA_DISABLE_BACKWARD_COMPATIBILITY 171 #ifndef VRNA_DISABLE_BACKWARD_COMPATIBILITY void free_path(vrna_path_t *path)
Free memory allocated by get_path() function.
char * s
Secondary structure in dot-bracket notation.
Definition: findpath.h:46
The most basic data structure required by many functions throughout the RNAlib.
Definition: fold_compound.h:132
int find_saddle(const char *seq, const char *s1, const char *s2, int width)
Find energy of a saddle point between 2 structures (search only direct path)
An element of a refolding path list.
Definition: findpath.h:44
Various data structures and pre-processor macros.
vrna_path_t * vrna_path_findpath(vrna_fold_compound_t *vc, const char *s1, const char *s2, int width)
Find refolding path between 2 structures (search only direct path)
int vrna_path_findpath_saddle_ub(vrna_fold_compound_t *vc, const char *s1, const char *s2, int width, int maxE)
Find energy of a saddle point between 2 structures (search only direct path)
double en
Free energy of current structure.
Definition: findpath.h:45
vrna_path_t * vrna_path_findpath_ub(vrna_fold_compound_t *vc, const char *s1, const char *s2, int width, int maxE)
Find refolding path between 2 structures (search only direct path)
vrna_path_t * get_path(const char *seq, const char *s1, const char *s2, int width)
Find refolding path between 2 structures (search only direct path)
int vrna_path_findpath_saddle(vrna_fold_compound_t *vc, const char *s1, const char *s2, int width)
Find energy of a saddle point between 2 structures (search only direct path)