TBI WORKING PAPERS 1997

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TBI Working Papers are usually works in progress or papers submitted for publication in refereed scientific journals. They contain accounts of the scientific work of the author(s) and do not necessarily represent the views of the TBI.

© NOTICE: All papers are copyrighted by the authors; revised versions that appear in print are copyrighted by the publication in which each appears. If you would like to use all or a portion of any paper, please contact the author.

97-pks-001 [Abstract] [Postscript] [PDF]
Genotypes with phenotypes: Adventures in an RNA Toy World
Peter Schuster
Biophys.Chem.,6:75-110 (1997)
Preprint number 97-04-036, Santa Fe Institut, Santa Fe, NM (1997)

97-12-099 [abstract] [Postscript not available]
RNA structures and folding: from conventional to new issues in structure predictions
Peter Schuster, Peter F. Stadler, Alexander Renner
Curr Opin Struct Biol 7: 229-235 (1997).

97-12-098 [abstract] [Postscript not available]
Spontaneous and Engineered Deletions in the 3'-Noncoding Region of Tick-Borne Encephalitis Virus: Construction of Highly Attenuated Mutants of Flavivirus.
Christian W. Mandl, Heidemarie Holzmann, Tamara Meixner, Susanne Rauscher, Peter F. Stadler, Steven L. Allison, Franz X. Heinz
J. Virology 72: 2132-2140 (1998).

97-12-097 [Abstract not available] [PostScript]
Generic Properties of the Sequence-Structure Relations of Biopolymers
Peter F. Stadler In: Proceedings of the 5th Triest Conference on the Chemical Evolution and Exobiology, J. Chela-Flores and F. Raulin (eds). Kluwer, Dordrecht 1998, pp.149-156

97-12-001 [abstract] [Postscript]
Structural Constraints and Neutrality in RNA
Ulrike Göbel, Christian V. Forst, and Peter Schuster
In: R. Hofestädt, T. Lengauer, M. Löffler, D. Schomburg (eds.), Proceedings of the German Conference on Bioinformatics 1996, Lecture Notes in Computer Science Vol. 1278. Springer Verlag, Berlin, Heidelberg, New York, 1997, pp.156-165

97-11-081 [abstract] [Postscript A4] [Postscript US]
Shaping Space: The Possible and the Attainable in RNA Genotype-Phenotype Mapping
Walter Fontana and Peter Schuster
J.Theor.Biol. 194: 491-515 (1998).

97-09-001 [abstract] [Postscript]
Fitness Landscapes Arising from the Sequence-Structure Maps of Biopolymers
P.F. Stadler
J.Mol.Struct.(THEOCHEM) 463: 7-19 (1999).

97-07-066 [abstract] [Postscript]
Sequence Redundancy in Biopolymers: A Study on RNA and Protein Structures
P. Schuster, P.F. Stadler
In: G. Myers (ed.) Viral Regulatory Structures. Addison-Wesley, Reading MA, 1998, pp 163-186.

97-07-065 [abstract] [Postscript]
Selection Dynamics in Autocatalytic Systems: Templates Replicating Through Binary Ligation
P.R. Wills, S.A. Kauffman, B.M.R. Stadler, P.F. Stadler
Bull.Math.Biol. 60: 1073-1098 (1998)

97-05-032 [abstract] [Postscript]
Cycles in Secondary Structure Graphs
P.F. Stadler
For a substantially expanded version see 98-01-001. [1998 List]

97-05-031 [abstract] [Postscript]
The Evolution of Diversity in Replicator Networks
R. Happel, P.F. Stadler
J.Theor.Biol. 195: 329-338 (1998)

97-03-030 [abstract] [Postscript]
RNA Structures with Pseudo-Knots
C.Haslinger, P.F. Stadler
Bull.Math.Biol. 61: 437-467 (1999)

97-03-08 [abstract] [Postscript]
Complex Adaptations and the Structure of Recombination Spaces
G.P. Wagner, P.F. Stadler
In: Proceedings of the Conference on Semi-Groups and Algebraic Engineering [University of Aizu, Japan, 1997], C. Nehaniv, M. Ito (Eds.), World Scientific, Singapore (1997), pp. 96-115

97-02-07 [abstract] [Postscript]
Density of States, Metastable States, and Saddle Points
Exploring the Energy Landscape of an RNA Molecule
J. Cupal, C. Flamm, A. Renner, P.F. Stadler
Proceedings of ISMB-97, T. Gaasterland, P. Karp,
K. Karplus, Ch. Ouzounis, Ch. Sander, & A. Valencia ( Eds.), AAAI Press, pp. 88-91

97-01-01 [abstract] [Postscript]
Correlation Length, Isotropy, and Meta-stable States
Ricardo García-Pelayo and Peter F. Stadler
Physica D 107:240-254 (1997)

97-IMB1 [abstract] [Postscript]
Molecular Evolution of Catalysis
Christian V. Forst
Proceedings of the Fourth European Conference on Artificial Life (ECAL97), Phil Husbands and Inman Harvey (eds.) MIT Press/Bradford Books 1997, pp.83-91.

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