Publications
BarMap: RNA Folding on Dynamic Energy Landscapes
Ivo L. Hofacker, Christoph Flamm, Christian Heine, Michael
T. Wolfinger, Gerik Scheuermann, Peter F. Stadler
submitted (2009)
Folding Kinetics of Large RNAs
Michael Geis, Christoph Flamm, Michael T. Wolfinger, Andrea Tanzer, Ivo L. Hofacker, Martin Middendorf, Christian Mandl, Peter
F. Stadler, Caroline Thurner
J. Mol. Biol. 379(1): 160-173 (2008)
[PDF]
Exploring the lower part of discrete polymer model energy landscapes
Michael T. Wolfinger, Sebastian Will, Ivo L. Hofacker, Rolf Backofen,
Peter F. Stadler
Europhys Lett. 74(4): 726-732 (2006)
[PDF]
Visualization of Lattice-Based Protein Folding Simulations
Sebastian Pötzsch, Gerik Scheuermann, Peter F. Stadler, Michael
T. Wolfinger, Christoph Flamm
IV'06: Proceedings of the conference on Information Visualization:
89-94 (2006)
IEEE Computer Society, Washington, DC, USA
[PDF]
Efficient Computation of RNA Folding Dynamics
Michael T. Wolfinger, W. Andreas Svrcek-Seiler, Christoph Flamm, Ivo
L. Hofacker, Peter F. Stadler
J.Phys.A: Math.Gen. 37: 4731-4741 (2004)
[PDF]
Barrier Trees of Degenerate Landscapes
Christoph Flamm, Ivo L. Hofacker, Peter F. Stadler, Michael
T. Wolfinger
Z.Phys.Chem. 216: 155-173 (2002)
[PDF]
Energy Landscapes of Biopolymers
Michael T. Wolfinger
PhD Dissertation (2004)
[PDF]
The Energy Landscape of RNA Folding
Michael T. Wolfinger
Masters Thesis (2001)
[PDF]