RNAlib-2.2.3
ligand.h
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1 #ifndef VIENNA_RNA_PACKAGE_LIGAND_H
2 #define VIENNA_RNA_PACKAGE_LIGAND_H
3 
12 
36 int
38  const char *seq,
39  const char *structure,
40  FLT_OR_DBL energy,
41  unsigned int options);
42 
43 int
44 vrna_sc_detect_hi_motif(vrna_fold_compound_t *vc,
45  const char *structure,
46  int *i,
47  int *j,
48  int *k,
49  int *l);
50 
51 int
52 vrna_sc_get_hi_motif( vrna_fold_compound_t *vc,
53  int *i,
54  int *j,
55  int *k,
56  int *l);
57 
61 #endif
int vrna_sc_add_hi_motif(vrna_fold_compound_t *vc, const char *seq, const char *structure, FLT_OR_DBL energy, unsigned int options)
Add soft constraints for hairpin or interior loop binding motif.
double FLT_OR_DBL
Typename for floating point number in partition function computations.
Definition: data_structures.h:39
The most basic data structure required by many functions throughout the RNAlib.
Definition: data_structures.h:389