RNAlib-2.4.0
plot_aln.h
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1 #ifndef VIENNA_RNA_PACKAGE_PLOT_ALN_H
2 #define VIENNA_RNA_PACKAGE_PLOT_ALN_H
3 
4 #ifdef VRNA_WARN_DEPRECATED
5 # ifdef __GNUC__
6 # define DEPRECATED(func) func __attribute__ ((deprecated))
7 # else
8 # define DEPRECATED(func) func
9 # endif
10 #else
11 # define DEPRECATED(func) func
12 #endif
13 
14 /* make this interface backward compatible with RNAlib < 2.2.0 */
15 #define VRNA_BACKWARD_COMPAT
16 
32 int PS_color_aln(const char *structure,
33  const char *filename,
34  const char *seqs[],
35  const char *names[]);
36 
37 
38 int
39 vrna_file_PS_aln(const char *filename,
40  const char **seqs,
41  const char **names,
42  const char *structure,
43  int columns);
44 
45 
46 int
47 vrna_file_PS_aln_sub(const char *filename,
48  const char **seqs,
49  const char **names,
50  const char *structure,
51  int start,
52  int end,
53  int columns);
54 
55 
59 int aliPS_color_aln(const char *structure,
60  const char *filename,
61  const char *seqs[],
62  const char *names[]);
63 
64 
65 #ifdef VRNA_BACKWARD_COMPAT
66 
67 #endif
68 
73 #endif
int PS_color_aln(const char *structure, const char *filename, const char *seqs[], const char *names[])
Produce PostScript sequence alignment color-annotated by consensus structure.
int aliPS_color_aln(const char *structure, const char *filename, const char *seqs[], const char *names[])