1 #ifndef VIENNA_RNA_PACKAGE_EQUILIBRIUM_PROBS_H 2 #define VIENNA_RNA_PACKAGE_EQUILIBRIUM_PROBS_H 5 #define VRNA_BACKWARD_COMPAT 9 #ifdef VRNA_WARN_DEPRECATED 11 # define DEPRECATED(func) func __attribute__ ((deprecated)) 13 # define DEPRECATED(func) func 16 # define DEPRECATED(func) func Data structure representing a single entry of an element probability list (e.g. list of pair probabil...
Definition: structure_utils.h:69
double vrna_mean_bp_distance(vrna_fold_compound_t *vc)
Get the mean base pair distance in the thermodynamic ensemble.
double FLT_OR_DBL
Typename for floating point number in partition function computations.
Definition: data_structures.h:48
The most basic data structure required by many functions throughout the RNAlib.
Definition: data_structures.h:463
Various data structures and pre-processor macros.
double vrna_mean_bp_distance_pr(int length, FLT_OR_DBL *pr)
Get the mean base pair distance in the thermodynamic ensemble from a probability matrix.
vrna_ep_t * vrna_stack_prob(vrna_fold_compound_t *vc, double cutoff)
Compute stacking probabilities.
FLT_OR_DBL * pr
A pointer to the base pair probability matrix.