RNAlib-2.4.5
Locally stable structures

Detailed Description

+ Collaboration diagram for Locally stable structures:

Modules

 Local MFE Structure Prediction and Z-scores
 
 Partition Function and Equilibrium Probabilities for Locally Stable Secondary Structures
 
 Local MFE Consensus Structure Prediction for Sequence Alignments
 

Files

file  Lfold.h
 Functions for locally optimal MFE structure prediction.
 
file  LPfold.h
 Partition function implementation for the Lfold algorithm.