1#ifndef __VIENNA_RNA_PACKAGE_PLEX_H__
2#define __VIENNA_RNA_PACKAGE_PLEX_H__
7extern int subopt_sorted;
12duplexT** Lduplexfold(
const char *s1,
15 const int extension_cost,
16 const int alignment_length,
27duplexT** Lduplexfold_XS(
const char*s1,
29 const int **access_s1,
30 const int **access_s2,
33 const int alignment_length,
43duplexT** Lduplexfold_C(
const char *s1,
46 const int extension_cost,
47 const int alignment_length,
50 const char* structure,
60duplexT** Lduplexfold_CXS(
const char*s1,
62 const int **access_s1,
63 const int **access_s2,
66 const int alignment_length,
68 const char* structure,
78void freeDuplexT(
duplexT** array);
All datastructures and typedefs shared among the Vienna RNA Package can be found here.
Definition data_structures.h:481