1#ifndef __VIENNA_RNA_PACKAGE_PROFILEDIST_H__
2#define __VIENNA_RNA_PACKAGE_PROFILEDIST_H__
5#define DEPRECATED(func) func __attribute__ ((deprecated))
7#define DEPRECATED(func) func
All datastructures and typedefs shared among the Vienna RNA Package can be found here.
float * Make_bp_profile(int length)
float * Make_bp_profile_bppm(double *bppm, int length)
condense pair probability matrix into a vector containing probabilities for unpaired,...
void print_bppm(const float *T)
print string representation of probability profile
void free_profile(float *T)
free space allocated in Make_bp_profile
float profile_edit_distance(const float *T1, const float *T2)
Align the 2 probability profiles T1, T2 .