RNAz cluster #13717

Summary

Genome/Assembly hg17
Chromosome/Contigchr10
Length 179
Position 97,145,716 - 97,145,895
Average P 0.984065
Maximum P 0.999862
Strand winner -

StructureStartEndStrand NLengthIDSCIzP
#28803 97,145,716 97,145,836 - 4 120 69.94 0.63 -1.7 0.947621
#28805 97,145,756 97,145,875 + 4 120 79.42 0.71 -2.35 0.9832
#28808 97,145,756 97,145,875 - 4 120 79.42 0.83 -2.9 0.998928
#28810 97,145,796 97,145,895 + 4 105 77.24 0.72 -2.28 0.990715
#28812 97,145,796 97,145,895 - 4 105 77.24 0.77 -3.22 0.999862

Overview

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Overview

RNA annotation

RNAdb

No hits below threshold in RNAdb

Rfam

No hits below threshold in Rfam

microRNA registry

No hits below threshold in microRNA registry

UTRdb

No hits below threshold in UTRdb

NONCODE

No hits below threshold in NONCODE

Coding gene annotation

Known genes based on SWISS-PROT, TrEMBL, mRNA, and RefSeq

IDNameStrandExon Intron5'-UTRCDS3'-UTR
AJ489942 C-Cbl associated protein. - - + - + -
AF136380 SH3P12 protein. - - + - + -
AF136381 C-Cbl-associated protein SH3P12. - - + - + -
AF330623 Brain R85FL (Retina R85). - - + - + -
AF356525 Sorbin and SH3 domain containing 1 - - + - + -
AF356526 Sorbin and SH3 domain containing 1. - - + - + -
AF356527 Sorbin and SH3 domain containing 1. - - + - + -
BC042612 Similar to sorbin and SH3 domain containing 1. - - + - + -
AB037717 Hypothetical protein KIAA1296 (Fragment). - - + - + -
AK022468 Hypothetical protein FLJ12406. - - + - - +
AL117472 Hypothetical protein. - - + - + -

RefSeq genes

IDNameStrandExon Intron5'-UTRCDS3'-UTR
NM_006434 Sorbin and SH3 domain containing 1 - - + - + -
NM_015385 Sorbin and SH3 domain containing 1 - - + - + -

Genscan predictions

IDStrandExon Intron
NT_030059.319 - - +

Geneid predictions

IDStrandExon Intron
chr10_992.1 - - +

EST

IDStrandExon Intron
BF674512 - - +