RNAz cluster #18316
Summary
| Genome/Assembly | hg17 |
| Chromosome/Contig | chr11 |
| Length | 184 |
| Position | 62,444,710 - 62,444,894 |
| Average P | 0.958694 |
| Maximum P | 0.999978 |
| Strand winner | + |
| Structure | Start | End | Strand | N | Length | ID | SCI | z | P |
|---|---|---|---|---|---|---|---|---|---|
| #37198 | 62,444,710 | 62,444,825 | + | 5 | 120 | 64.61 | 0.45 | -2.28 | 0.980893 |
| #37206 | 62,444,750 | 62,444,858 | + | 4 | 119 | 74.17 | 0.82 | -3.72 | 0.999978 |
| #37211 | 62,444,750 | 62,444,858 | - | 4 | 119 | 74.17 | 0.6 | -3.24 | 0.999896 |
| #37217 | 62,444,789 | 62,444,894 | + | 5 | 120 | 61.15 | 0.41 | -1.99 | 0.85401 |
Overview
RNA annotation
RNAdb
No hits below threshold in RNAdb
Rfam
No hits below threshold in Rfam
microRNA registry
No hits below threshold in microRNA registry
UTRdb
No hits below threshold in UTRdb
NONCODE
No hits below threshold in NONCODE
Coding gene annotation
Known genes based on SWISS-PROT, TrEMBL, mRNA, and RefSeq
| ID | Name | Strand | Exon | Intron | 5'-UTR | CDS | 3'-UTR |
|---|---|---|---|---|---|---|---|
| BC022984 | Cholinergic receptor, muscarinic 1 | - |  |
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| AJ006520 | M1 muscarinic acetylcholine receptor protein (Fragment). | - | |
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RefSeq genes
| ID | Name | Strand | Exon | Intron | 5'-UTR | CDS | 3'-UTR |
|---|---|---|---|---|---|---|---|
| NM_000738 | Cholinergic receptor, muscarinic 1 | - | |
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Genscan predictions
No Genscan gene prediction in this region.
Geneid predictions
No Geneid gene prediction in this region.
EST
| ID | Strand | Exon | Intron |
|---|---|---|---|
| AL537084 | - | |
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| BE261583 | ? | |
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