RNAz cluster #8537
Summary
| Genome/Assembly | hg17 |
| Chromosome/Contig | chr1 |
| Length | 132 |
| Position | 189,758,070 - 189,758,202 |
| Average P | 0.785933 |
| Maximum P | 0.998486 |
| Strand winner | - |
| Structure | Start | End | Strand | N | Length | ID | SCI | z | P |
|---|---|---|---|---|---|---|---|---|---|
| #19676 | 189,758,070 | 189,758,202 | + | 4 | 132 | 87.12 | 0.85 | -1.42 | 0.57338 |
| #19678 | 189,758,070 | 189,758,202 | - | 4 | 132 | 87.12 | 0.92 | -3.4 | 0.998486 |
Overview
RNA annotation
RNAdb
| ID | E-value | Identity | Strand | Name |
|---|---|---|---|---|
| FT24907 | 1.1e-21 | 88.89 | - | TF22826 Mus musculus (fantom2) |
Rfam
No hits below threshold in Rfam
microRNA registry
No hits below threshold in microRNA registry
UTRdb
No hits below threshold in UTRdb
NONCODE
No hits below threshold in NONCODE
Coding gene annotation
Known genes based on SWISS-PROT, TrEMBL, mRNA, and RefSeq
| ID | Name | Strand | Exon | Intron | 5'-UTR | CDS | 3'-UTR |
|---|---|---|---|---|---|---|---|
| BC015521 | Hypothetical protein (Ubiquitin carboxyl-terminal hydrolase L5). | - |  |
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| BC025369 | Hypothetical protein. | - | |
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| AF147717 | Ubiquitin carboxyl-terminal hydrolase L5 | - | |
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RefSeq genes
| ID | Name | Strand | Exon | Intron | 5'-UTR | CDS | 3'-UTR |
|---|---|---|---|---|---|---|---|
| NM_015984 | Ubiquitin C-terminal hydrolase UCH37 | - | |
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Genscan predictions
| ID | Strand | Exon | Intron |
|---|---|---|---|
| NT_004487.1090 | - | |
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Geneid predictions
No Geneid gene prediction in this region.
EST
| ID | Strand | Exon | Intron |
|---|---|---|---|
| BF215324 | - | |
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| BG215572 | + | |
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