RNAz cluster #881

Summary

Genome/Assembly hg17
Chromosome/Contigchr1
Length 119
Position 21,639,010 - 21,639,129
Average P 0.990713
Maximum P 0.998914
Strand winner -

StructureStartEndStrand NLengthIDSCIzP
#5052 21,639,010 21,639,129 + 4 120 82.31 0.83 -2.39 0.982512
#5055 21,639,010 21,639,129 - 4 120 82.31 0.78 -3.47 0.998914

Overview

map map

Overview

RNA annotation

RNAdb

No hits below threshold in RNAdb

Rfam

No hits below threshold in Rfam

microRNA registry

No hits below threshold in microRNA registry

UTRdb

No hits below threshold in UTRdb

NONCODE

No hits below threshold in NONCODE

Coding gene annotation

Known genes based on SWISS-PROT, TrEMBL, mRNA, and RefSeq

IDNameStrandExon Intron5'-UTRCDS3'-UTR
BC021289 Alkaline phosphatase, liver/bone/kidney + - + - + -
BC066116 ALPL protein (Fragment). + - + - + -
AB011406 Alkalin phosphatase. + - + - + -
AB012643 Alkaline phosphatase (Fragment). + - + - + -

RefSeq genes

IDNameStrandExon Intron5'-UTRCDS3'-UTR
NM_000478 Tissue non-specific alkaline phosphatase + - + - + -

Genscan predictions

IDStrandExon Intron
NT_004610.109 + - +

Geneid predictions

IDStrandExon Intron
chr1_416.1 + - +

EST

IDStrandExon Intron
BF843581 ? - +
BQ062056 + - +