RNAz cluster #25547

Summary

Genome/Assembly	hg17
Chromosome/Contig	chr12
Length	246
Position	97,495,881 - 97,496,127
Average P	0.941147
Maximum P	0.999071
Strand winner	+

Structure	Start	End	Strand	N	Length	ID	SCI	z	P
#50828	97,495,881	97,495,998	+	6	120	73.38	0.45	-3.45	0.999071
#50832	97,495,881	97,495,998	-	6	120	73.38	0.42	-2.68	0.990876
#50840	97,495,998	97,496,111	+	6	120	72.01	0.5	-1.87	0.883416
#50841	97,496,038	97,496,127	+	6	96	67.3	0.73	-4.83	0.932894
#50842	97,496,038	97,496,127	-	6	96	67.3	0.38	-2.01	0.899476

Overview

RNA annotation

RNAdb

No hits below threshold in RNAdb

Rfam

No hits below threshold in Rfam

microRNA registry

No hits below threshold in microRNA registry

UTRdb

No hits below threshold in UTRdb

NONCODE

No hits below threshold in NONCODE

Coding gene annotation

Known genes based on SWISS-PROT, TrEMBL, mRNA, and RefSeq

ID	Name	Strand	Exon	Intron	5'-UTR	CDS	3'-UTR
BC001328	Solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3	+
BC051367	SLC25A3 protein (Fragment).	+
BX647062	Hypothetical protein DKFZp686J11229 (Fragment).	+

RefSeq genes

ID	Name	Strand	Exon	Intron	5'-UTR	CDS	3'-UTR
NM_002635	Solute carrier family 25 member 3 isoform b	+
NM_005888	Solute carrier family 25 member 3 isoform a	+
NM_213611	Solute carrier family 25 member 3 isoform b	+
NM_213612	Solute carrier family 25 member 3 isoform c	+

Genscan predictions

ID	Strand	Exon	Intron
NT_019546.342	+

Geneid predictions

ID	Strand	Exon	Intron
chr12_985.1	+

EST

ID	Strand	Exon	Intron
AA099093	+
BE696186	?