RNAz cluster #44330

Summary

Genome/Assembly hg17
Chromosome/Contigchr17
Length 113
Position 44,012,203 - 44,012,316
Average P 0.966903
Maximum P 0.993846
Strand winner +

StructureStartEndStrand NLengthIDSCIzP
#84663 44,012,203 44,012,316 + 6 120 74.65 0.63 -2.59 0.993846
#84668 44,012,203 44,012,316 - 6 120 74.65 0.96 -3.8 0.93996

Overview

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Overview

RNA annotation

RNAdb

IDE-valueIdentityStrandName
LIT3081 0 100 - miR-10a Homo sapiens (combinedlit)
LIT1775 0 100 - miR-10a Mus musculus (combinedlit)
LIT1776 0 100 - miR-10a Mus musculus (combinedlit)
LIT1648 0 100 - miR-10a Rattus norvegicus (combinedlit)

Rfam

IDE-valueIdentityStrandName
RF00104 2.9e-37 100 - mir-10
RF00104 1.3e-08 96.88 - mir-10
RF00104 2e-07 96.67 - mir-10
RF00104 1.3e-08 100 - mir-10

microRNA registry

IDE-valueIdentityStrandName
hsa-mir-10a 0 100 - hsa-mir-10a
rno-mir-10a 0 100 - rno-mir-10a
mmu-mir-10a 0 100 - mmu-mir-10a
dre-mir-10a 1.1e-17 86.73 - dre-mir-10a
dre-mir-10b 4e-08 96.43 - dre-mir-10b
gga-mir-10b 4e-08 96.43 - gga-mir-10b
rno-mir-10b 4e-08 96.43 - rno-mir-10b
hsa-mir-10b 4e-08 96.43 - hsa-mir-10b
mmu-mir-10b 4e-08 96.43 - mmu-mir-10b
dps-mir-10 6.3e-07 100 - dps-mir-10
dme-mir-10 6.3e-07 100 - dme-mir-10

UTRdb

No hits below threshold in UTRdb

NONCODE

No hits below threshold in NONCODE

Coding gene annotation

Known genes based on SWISS-PROT, TrEMBL, mRNA, and RefSeq

No gene from this set in this region.

RefSeq genes

No RefSeq genes in this region.

Genscan predictions

IDStrandExon Intron
NT_010783.152 - - +

Geneid predictions

IDStrandExon Intron
chr17_927.1 - - +

EST

IDStrandExon Intron
AI125255 + - +
AW852509 ? - +
CN265475 - - +
CN286812 ? + -