RNAz cluster #46558
Summary
| Genome/Assembly | hg17 |
| Chromosome/Contig | chr18 |
| Length | 123 |
| Position | 17,545,953 - 17,546,076 |
| Average P | 0.904761 |
| Maximum P | 0.973 |
| Strand winner | - |
| Structure | Start | End | Strand | N | Length | ID | SCI | z | P |
|---|---|---|---|---|---|---|---|---|---|
| #88766 | 17,545,953 | 17,546,076 | + | 6 | 127 | 76.07 | 0.51 | -2 | 0.836522 |
| #88767 | 17,545,953 | 17,546,076 | - | 6 | 127 | 76.07 | 0.86 | -3.39 | 0.973 |
Overview
RNA annotation
RNAdb
| ID | E-value | Identity | Strand | Name |
|---|---|---|---|---|
| LIT1083 | 1e-21 | 86.49 | - | MBI-61 Mus musculus (combinedlit) |
Rfam
No hits below threshold in Rfam
microRNA registry
No hits below threshold in microRNA registry
UTRdb
No hits below threshold in UTRdb
NONCODE
| ID | E-value | Identity | Strand | Name |
|---|---|---|---|---|
| n1527 | 4.6e-23 | 86.49 | - | snoRNA |
Coding gene annotation
Known genes based on SWISS-PROT, TrEMBL, mRNA, and RefSeq
No gene from this set in this region.
RefSeq genes
No RefSeq genes in this region.
Genscan predictions
No Genscan gene prediction in this region.
Geneid predictions
No Geneid gene prediction in this region.
EST
| ID | Strand | Exon | Intron |
|---|---|---|---|
| BE255862 | + |  |
 |