RNAz cluster #47135
Summary
| Genome/Assembly | hg17 |
| Chromosome/Contig | chr18 |
| Length | 270 |
| Position | 29,015,031 - 29,015,301 |
| Average P | 0.972958 |
| Maximum P | 0.998927 |
| Strand winner | - |
| Structure | Start | End | Strand | N | Length | ID | SCI | z | P |
|---|---|---|---|---|---|---|---|---|---|
| #89854 | 29,015,031 | 29,015,141 | + | 5 | 120 | 90.82 | 0.82 | -1.91 | 0.940279 |
| #89856 | 29,015,031 | 29,015,141 | - | 5 | 120 | 90.82 | 0.93 | -2.12 | 0.998927 |
| #89858 | 29,015,061 | 29,015,181 | + | 5 | 120 | 97.32 | 0.91 | -2.11 | 0.9956 |
| #89859 | 29,015,061 | 29,015,181 | - | 5 | 120 | 97.32 | 0.94 | -1.91 | 0.995194 |
| #89860 | 29,015,101 | 29,015,221 | + | 5 | 120 | 97.67 | 0.95 | -1.97 | 0.996399 |
| #89865 | 29,015,181 | 29,015,301 | + | 5 | 120 | 92.92 | 0.83 | -2.16 | 0.987394 |
| #89867 | 29,015,181 | 29,015,301 | - | 5 | 120 | 92.92 | 0.8 | -1.93 | 0.896913 |
Overview
RNA annotation
RNAdb
No hits below threshold in RNAdb
Rfam
No hits below threshold in Rfam
microRNA registry
No hits below threshold in microRNA registry
UTRdb
No hits below threshold in UTRdb
NONCODE
No hits below threshold in NONCODE
Coding gene annotation
Known genes based on SWISS-PROT, TrEMBL, mRNA, and RefSeq
| ID | Name | Strand | Exon | Intron | 5'-UTR | CDS | 3'-UTR |
|---|---|---|---|---|---|---|---|
| AK129955 | CDNA FLJ26445 fis, clone kDaN02608. | - |  |
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| AK126038 | CDNA FLJ44050 fis, clone TESTI4032895. | - | |
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RefSeq genes
| ID | Name | Strand | Exon | Intron | 5'-UTR | CDS | 3'-UTR |
|---|---|---|---|---|---|---|---|
| NM_198995 | Chromosome 18 open reading frame 34 | - | |
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Genscan predictions
| ID | Strand | Exon | Intron |
|---|---|---|---|
| NT_010966.243 | - | |
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Geneid predictions
| ID | Strand | Exon | Intron |
|---|---|---|---|
| chr18_269.1 | - | |
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EST
| ID | Strand | Exon | Intron |
|---|---|---|---|
| AA446150 | - | |
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