RNAz cluster #61099

Summary

Genome/Assembly	hg17
Chromosome/Contig	chr20
Length	283
Position	1,222,054 - 1,222,337
Average P	0.925073
Maximum P	0.999941
Strand winner	+

Structure	Start	End	Strand	N	Length	ID	SCI	z	P
#115226	1,222,054	1,222,171	+	4	120	74.72	0.68	-1.9	0.951903
#115232	1,222,054	1,222,171	-	4	120	74.72	0.64	-1.63	0.706603
#115235	1,222,094	1,222,210	+	4	120	75.42	0.74	-3.21	0.999941
#115239	1,222,094	1,222,210	-	4	120	75.42	0.72	-3.2	0.999937
#115242	1,222,131	1,222,249	+	4	120	72.94	0.73	-2.66	0.999805
#115244	1,222,131	1,222,249	-	4	120	72.94	0.64	-1.68	0.856393
#115247	1,222,171	1,222,289	+	4	120	76.85	0.63	-2.65	0.996605
#115250	1,222,171	1,222,289	-	4	120	76.85	0.46	-2.37	0.626558
#115255	1,222,210	1,222,328	+	4	120	80.61	0.66	-3.14	0.997673
#115260	1,222,210	1,222,328	-	4	120	80.61	0.65	-3.02	0.995938
#115262	1,222,249	1,222,337	+	4	89	84.93	0.72	-3.12	0.98757
#115264	1,222,249	1,222,337	-	4	89	84.93	0.66	-3.47	0.981953

Overview

RNA annotation

RNAdb

No hits below threshold in RNAdb

Rfam

No hits below threshold in Rfam

microRNA registry

No hits below threshold in microRNA registry

UTRdb

No hits below threshold in UTRdb

NONCODE

No hits below threshold in NONCODE

Coding gene annotation

Known genes based on SWISS-PROT, TrEMBL, mRNA, and RefSeq

ID	Name	Strand	Exon	Intron	5'-UTR	CDS	3'-UTR
BC035788	Hypothetical protein.	+
AB002372	Syntaphilin	+

RefSeq genes

ID	Name	Strand	Exon	Intron	5'-UTR	CDS	3'-UTR
NM_014723	Syntaphilin	+

Genscan predictions

No Genscan gene prediction in this region.

Geneid predictions

No Geneid gene prediction in this region.

EST

ID	Strand	Exon	Intron
AL049037	+