RNAz cluster #64035
Summary
| Genome/Assembly |
hg17 |
| Chromosome/Contig | chr21 |
| Length |
159 |
| Position |
31,958,501 - 31,958,660 |
| Average P |
0.999422 |
| Maximum P |
0.999422 |
| Strand winner |
+ |
| Structure | Start | End | Strand |
N | Length | ID | SCI | z | P |
|---|
|
#717 |
31,958,501 |
31,958,660 |
+ |
5 |
166 |
81.46 |
0.87 |
-3.82 |
0.999422 |
Overview
RNA annotation
RNAdb
| ID | E-value | Identity | Strand | Name |
|---|
|
LIT1083 |
1.5e-30 |
85.9 |
+ |
MBI-61 Mus musculus (combinedlit) |
Rfam
No hits below threshold in Rfam
microRNA registry
No hits below threshold in microRNA registry
UTRdb
No hits below threshold in UTRdb
NONCODE
| ID | E-value | Identity | Strand | Name |
|---|
|
n1527 |
6.9e-32 |
85.9 |
+ |
snoRNA |
Coding gene annotation
Known genes based on SWISS-PROT, TrEMBL, mRNA, and RefSeq
| ID | Name | Strand | Exon |
Intron | 5'-UTR | CDS | 3'-UTR |
|---|
| X02317 |
Superoxide dismutase 1, soluble (amyotrophic lateral sclerosis 1 (adult)) |
+ |
 |
 |
|
|
|
| BT006676 |
Superoxide dismutase 1, soluble (Amyotrophic lateral sclerosis 1 (Adult)). |
+ |
|
|
|
|
|
RefSeq genes
| ID | Name | Strand | Exon |
Intron | 5'-UTR | CDS | 3'-UTR |
|---|
| NM_000454 |
Superoxide dismutase 1, soluble |
+ |
|
|
|
|
|
Genscan predictions
| ID | Strand | Exon |
Intron |
|---|
| NT_011512.305 |
+ |
|
|
Geneid predictions
| ID | Strand | Exon |
Intron |
|---|
| chr21_125.1 |
+ |
|
|
EST