RNAz cluster #65420
Summary
| Genome/Assembly | hg17 |
| Chromosome/Contig | chr22 |
| Length | 153 |
| Position | 41,335,747 - 41,335,900 |
| Average P | 0.944329 |
| Maximum P | 0.944329 |
| Strand winner | + |
| Structure | Start | End | Strand | N | Length | ID | SCI | z | P |
|---|---|---|---|---|---|---|---|---|---|
| #3208 | 41,335,747 | 41,335,900 | + | 6 | 165 | 80.37 | 0.77 | -2.46 | 0.944329 |
Overview
RNA annotation
RNAdb
No hits below threshold in RNAdb
Rfam
| ID | E-value | Identity | Strand | Name |
|---|---|---|---|---|
| RF00007 | 0 | 91.33 | + | U12 |
| RF00007 | 0 | 91.33 | + | U12 |
| RF00007 | 6.1e-33 | 89.15 | + | U12 |
microRNA registry
No hits below threshold in microRNA registry
UTRdb
No hits below threshold in UTRdb
NONCODE
| ID | E-value | Identity | Strand | Name |
|---|---|---|---|---|
| n4547 | 0 | 100 | + | u12 snRNA |
| n4351 | 0 | 100 | + | u12 snRNA |
| n4546 | 0 | 91.33 | + | u12 snRNA |
| n4544 | 0 | 90.6 | + | u12 snRNA |
| n4545 | 1.1e-33 | 89.15 | + | u12 snRNA |
Coding gene annotation
Known genes based on SWISS-PROT, TrEMBL, mRNA, and RefSeq
No gene from this set in this region.
RefSeq genes
No RefSeq genes in this region.
Genscan predictions
| ID | Strand | Exon | Intron |
|---|---|---|---|
| NT_011520.655 | - |  |
 |
Geneid predictions
| ID | Strand | Exon | Intron |
|---|---|---|---|
| chr22_568.1 | - | |
|
EST
| ID | Strand | Exon | Intron |
|---|---|---|---|
| AA650081 | ? | |
|