RNAz cluster #80237

Summary

Genome/Assembly hg17
Chromosome/Contigchr5
Length 79
Position 40,868,515 - 40,868,594
Average P 0.902473
Maximum P 0.929942
Strand winner +

StructureStartEndStrand NLengthIDSCIzP
#145108 40,868,515 40,868,594 + 6 81 78.66 0.6 -2.25 0.929942
#145109 40,868,515 40,868,594 - 6 81 78.66 0.69 -1.7 0.875004

Overview

map map map map

Overview

RNA annotation

RNAdb

IDE-valueIdentityStrandName
LIT1154 5.7e-16 92.98 - MBII-240 Mus musculus (combinedlit)

Rfam

No hits below threshold in Rfam

microRNA registry

No hits below threshold in microRNA registry

UTRdb

No hits below threshold in UTRdb

NONCODE

IDE-valueIdentityStrandName
n1449 2.6e-17 92.98 - snoRNA

Coding gene annotation

Known genes based on SWISS-PROT, TrEMBL, mRNA, and RefSeq

IDNameStrandExon Intron5'-UTRCDS3'-UTR
BC067790 Hypothetical protein (Fragment). - - + - + -
D23661 Ribosomal protein L37 - - + - + -

RefSeq genes

IDNameStrandExon Intron5'-UTRCDS3'-UTR
NM_000997 Ribosomal protein L37 - - + - + -

Genscan predictions

No Genscan gene prediction in this region.

Geneid predictions

IDStrandExon Intron
chr5_335.1 - - +

EST

IDStrandExon Intron
BU159405 - - +
AV744453 ? - +
AA156256 + - +