RNAz cluster #81645
Summary
| Genome/Assembly | hg17 |
| Chromosome/Contig | chr5 |
| Length | 130 |
| Position | 82,395,781 - 82,395,911 |
| Average P | 0.998909 |
| Maximum P | 0.998909 |
| Strand winner | - |
| Structure | Start | End | Strand | N | Length | ID | SCI | z | P |
|---|---|---|---|---|---|---|---|---|---|
| #147487 | 82,395,781 | 82,395,911 | - | 4 | 132 | 86.39 | 0.93 | -3.62 | 0.998909 |
Overview
RNA annotation
RNAdb
| ID | E-value | Identity | Strand | Name |
|---|---|---|---|---|
| FT24907 | 9.7e-13 | 88.16 | - | TF22826 Mus musculus (fantom2) |
Rfam
No hits below threshold in Rfam
microRNA registry
No hits below threshold in microRNA registry
UTRdb
No hits below threshold in UTRdb
NONCODE
No hits below threshold in NONCODE
Coding gene annotation
Known genes based on SWISS-PROT, TrEMBL, mRNA, and RefSeq
| ID | Name | Strand | Exon | Intron | 5'-UTR | CDS | 3'-UTR |
|---|---|---|---|---|---|---|---|
| BC026285 | Similar to RIKEN cDNA 0610041E09 gene. | - |  |
 |
|
|
|
RefSeq genes
| ID | Name | Strand | Exon | Intron | 5'-UTR | CDS | 3'-UTR |
|---|---|---|---|---|---|---|---|
| NM_174909 | Hypothetical protein MGC23909 | - | |
|
|
|
|
Genscan predictions
No Genscan gene prediction in this region.
Geneid predictions
| ID | Strand | Exon | Intron |
|---|---|---|---|
| chr5_679.1 | - | |
|
EST
| ID | Strand | Exon | Intron |
|---|---|---|---|
| AA622590 | ? | |
|
| AA405443 | - | |
|