RNAz cluster #86084
Summary
| Genome/Assembly | hg17 |
| Chromosome/Contig | chr5 |
| Length | 199 |
| Position | 170,629,369 - 170,629,568 |
| Average P | 0.822094 |
| Maximum P | 0.999509 |
| Strand winner | - |
| Structure | Start | End | Strand | N | Length | ID | SCI | z | P |
|---|---|---|---|---|---|---|---|---|---|
| #155577 | 170,629,369 | 170,629,489 | + | 4 | 120 | 92.78 | 0.9 | -2.51 | 0.985892 |
| #155583 | 170,629,409 | 170,629,529 | + | 5 | 120 | 95 | 0.84 | -1.37 | 0.625629 |
| #155585 | 170,629,409 | 170,629,529 | - | 5 | 120 | 95 | 0.93 | -2.24 | 0.999509 |
| #155593 | 170,629,449 | 170,629,568 | - | 5 | 120 | 93.97 | 0.89 | -1.22 | 0.677345 |
Overview
RNA annotation
RNAdb
No hits below threshold in RNAdb
Rfam
No hits below threshold in Rfam
microRNA registry
No hits below threshold in microRNA registry
UTRdb
No hits below threshold in UTRdb
NONCODE
No hits below threshold in NONCODE
Coding gene annotation
Known genes based on SWISS-PROT, TrEMBL, mRNA, and RefSeq
| ID | Name | Strand | Exon | Intron | 5'-UTR | CDS | 3'-UTR |
|---|---|---|---|---|---|---|---|
| AF222747 | RAN binding protein 17 | + |  |
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| AK057478 | Hypothetical protein FLJ32916. | + | |
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| AJ288953 | Hypothetical protein. | + | |
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| AJ288954 | Hypothetical protein. | + | |
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RefSeq genes
| ID | Name | Strand | Exon | Intron | 5'-UTR | CDS | 3'-UTR |
|---|---|---|---|---|---|---|---|
| NM_022897 | RAN binding protein 17 | + | |
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Genscan predictions
| ID | Strand | Exon | Intron |
|---|---|---|---|
| NT_023133.256 | + | |
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Geneid predictions
| ID | Strand | Exon | Intron |
|---|---|---|---|
| chr5_1386.1 | + | |
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EST
| ID | Strand | Exon | Intron |
|---|---|---|---|
| AA342383 | + | |
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