RNAz cluster #105502
Summary
| Genome/Assembly | hg17 |
| Chromosome/Contig | chr9 |
| Length | 138 |
| Position | 92,134,300 - 92,134,438 |
| Average P | 0.892045 |
| Maximum P | 0.992209 |
| Strand winner | - |
| Structure | Start | End | Strand | N | Length | ID | SCI | z | P |
|---|---|---|---|---|---|---|---|---|---|
| #189479 | 92,134,300 | 92,134,438 | + | 5 | 160 | 74.12 | 0.55 | -1.79 | 0.791881 |
| #189483 | 92,134,300 | 92,134,438 | - | 5 | 160 | 74.12 | 0.81 | -1.84 | 0.992209 |
Overview
RNA annotation
RNAdb
No hits below threshold in RNAdb
Rfam
No hits below threshold in Rfam
microRNA registry
No hits below threshold in microRNA registry
UTRdb
No hits below threshold in UTRdb
NONCODE
No hits below threshold in NONCODE
Coding gene annotation
Known genes based on SWISS-PROT, TrEMBL, mRNA, and RefSeq
| ID | Name | Strand | Exon | Intron | 5'-UTR | CDS | 3'-UTR |
|---|---|---|---|---|---|---|---|
| BX537429 | Hypothetical protein DKFZp686O10151. | - |  |
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| BX538109 | Hypothetical protein DKFZp686L17145. | - | |
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| BX537417 | Hypothetical protein DKFZp686L0869. | - | |
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| D28473 | Isoleucine-tRNA synthetase | - | |
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RefSeq genes
| ID | Name | Strand | Exon | Intron | 5'-UTR | CDS | 3'-UTR |
|---|---|---|---|---|---|---|---|
| NM_002161 | Isoleucine-tRNA synthetase | - | |
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| NM_013417 | Isoleucine-tRNA synthetase | - | |
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Genscan predictions
| ID | Strand | Exon | Intron |
|---|---|---|---|
| NT_008470.42 | - | |
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Geneid predictions
| ID | Strand | Exon | Intron |
|---|---|---|---|
| chr9_687.1 | - | |
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EST
| ID | Strand | Exon | Intron |
|---|---|---|---|
| AA312424 | - | |
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| AI940253 | ? | |
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