cvodeSolver.c File Reference

#include <stdio.h>
#include <stdlib.h>
#include "cvodes.h"
#include "cvdense.h"
#include "nvector_serial.h"
#include "sbmlsolver/cvodedata.h"
#include "sbmlsolver/processAST.h"
#include "sbmlsolver/odeModel.h"
#include "sbmlsolver/variableIndex.h"
#include "sbmlsolver/solverError.h"
#include "sbmlsolver/integratorInstance.h"
#include "sbmlsolver/cvodeSolver.h"
#include "sbmlsolver/sensSolver.h"
#include "sbmlsolver/modelSimplify.h"

Include dependency graph for cvodeSolver.c:

Functions
SBML_ODESOLVER_API int	IntegratorInstance_cvodeOneStep (integratorInstance_t *engine)
	Calls CVODE to move the current simulation one time step.
int	IntegratorInstance_createCVODESolverStructures (integratorInstance_t *engine)
	creates CVODE structures and fills cvodeSolver, returns 1 on success or 0 on failure
void	IntegratorInstance_freeCVODESolverStructures (integratorInstance_t *engine)
SBML_ODESOLVER_API void	IntegratorInstance_printCVODEStatistics (integratorInstance_t *engine, FILE *f)
	Prints some final statistics of the calls to CVODE routines, that are located in CVODE's iopt array.
int	check_flag (void *flagvalue, char *funcname, int opt, FILE *f)
void	f (realtype t, N_Vector y, N_Vector ydot, void *f_data)
	f routine: Compute f(t,x) = df/dx .
void	JacODE (long int N, DenseMat J, realtype t, N_Vector y, N_Vector fy, void *jac_data, N_Vector vtemp1, N_Vector vtemp2, N_Vector vtemp3)
	Jacobian routine: Compute J(t,x) = df/dx.

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