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printModel.h

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00001 /*
00002   Last changed Time-stamp: <2005-11-08 11:44:21 raim>
00003   $Id: printModel.h,v 1.3 2005/11/08 10:49:40 raimc Exp $
00004 */
00005 /* 
00006  *
00007  * This application is free software; you can redistribute it and/or modify
00008  * it under the terms of the GNU Lesser General Public License as published
00009  * by the Free Software Foundation; either version 2.1 of the License, or
00010  * any later version.
00011  *
00012  * This application  is distributed in the hope that it will be useful, but
00013  * WITHOUT ANY WARRANTY, WITHOUT EVEN THE IMPLIED WARRANTY OF
00014  * MERCHANTABILITY OR FITNESS FOR A PARTICULAR PURPOSE. The software and
00015  * documentation provided hereunder is on an "as is" basis, and the
00016  * authors have no obligations to provide maintenance, support,
00017  * updates, enhancements or modifications.  In no event shall the
00018  * authors be liable to any party for direct, indirect, special,
00019  * incidental or consequential damages, including lost profits, arising
00020  * out of the use of this software and its documentation, even if the
00021  * authors have been advised of the possibility of such damage.  See
00022  * the GNU Lesser General Public License for more details.
00023  *
00024  * You should have received a copy of the GNU Lesser General Public License
00025  * along with this library; if not, write to the Free Software Foundation,
00026  * Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA.
00027  *
00028  * The original code contained here was initially developed by:
00029  *
00030  *     Rainer Machne
00031  *
00032  * Contributor(s):
00033  *
00034  */
00035 
00036 #ifndef _PRINTMODEL_H_
00037 #define _PRINTMODEL_H_
00038 
00039 /* print model structures to file */
00040 void printModel(Model_t *, FILE *);
00041 void printSpecies(Model_t *, FILE *);
00042 void printReactions(Model_t *, FILE *);
00043 void printODEs(odeModel_t *, FILE *);
00044 void printODEsToSBML(Model_t *ode, FILE *);
00045 void printJacobian(odeModel_t *, FILE *);
00046 /* print results of simulation to file */
00047 void printConcentrationTimeCourse(cvodeData_t *, FILE *);
00048 void printOdeTimeCourse(cvodeData_t *, FILE *);
00049 void printReactionTimeCourse(cvodeData_t *, Model_t *, FILE *);
00050 void printJacobianTimeCourse(cvodeData_t *, FILE *);
00051 void printDeterminantTimeCourse(cvodeData_t *, ASTNode_t *, FILE *);
00052 
00053 void printPhase(cvodeData_t *);
00054 
00055 #endif
00056 /* End of file */

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