#include <ViennaRNA/2Dfold.h>
Variables compound for 2Dfold MFE folding. More…
// fields vrna_param_t* P int do_backtrack char* ptype char* sequence short* S short* S1 unsigned int maxD1 unsigned int maxD2 unsigned int* mm1 unsigned int* mm2 int* my_iindx double temperature unsigned int* referenceBPs1 unsigned int* referenceBPs2 unsigned int* bpdist short* reference_pt1 short* reference_pt2 int circ int dangles unsigned int seq_length int*** E_F5 int*** E_F3 int*** E_C int*** E_M int*** E_M1 int*** E_M2 int** E_Fc int** E_FcH int** E_FcI int** E_FcM int** l_min_values int** l_max_values int* k_min_values int* k_max_values int** l_min_values_m int** l_max_values_m int* k_min_values_m int* k_max_values_m int** l_min_values_m1 int** l_max_values_m1 int* k_min_values_m1 int* k_max_values_m1 int** l_min_values_f int** l_max_values_f int* k_min_values_f int* k_max_values_f int** l_min_values_f3 int** l_max_values_f3 int* k_min_values_f3 int* k_max_values_f3 int** l_min_values_m2 int** l_max_values_m2 int* k_min_values_m2 int* k_max_values_m2 int* l_min_values_fc int* l_max_values_fc int k_min_values_fc int k_max_values_fc int* l_min_values_fcH int* l_max_values_fcH int k_min_values_fcH int k_max_values_fcH int* l_min_values_fcI int* l_max_values_fcI int k_min_values_fcI int k_max_values_fcI int* l_min_values_fcM int* l_max_values_fcM int k_min_values_fcM int k_max_values_fcM int* E_F5_rem int* E_F3_rem int* E_C_rem int* E_M_rem int* E_M1_rem int* E_M2_rem int E_Fc_rem int E_FcH_rem int E_FcI_rem int E_FcM_rem vrna_fold_compound_t* compatibility
vrna_param_t* P
int do_backtrack
char* ptype
char* sequence
short* S1
unsigned int maxD1
unsigned int maxD2
unsigned int* mm1
unsigned int* mm2
int* my_iindx
unsigned int* referenceBPs1
unsigned int* referenceBPs2
unsigned int* bpdist