RNA sequences come in a variety of formats. The sequence format used
throughout the ViennaRNA Package is very simple. An sequence
file contains one or more sequences. Each sequence must appear as a
single line in the file without embedded white spaces. A sequence may
be preceded by a special line starting with the `>' character
followed by a sequence name. This name will be used by the programs in
the ViennaRNA Package as basename for the PostScript output
files for this sequence. Note that this is almost the fasta
sequence format, except that no line-breaks are allowed within a sequence
while the header line is optional. Following programs provide full
fasta support: RNAfold, RNAsubopt, RNAcofold, RNAKplex, RNALfold,
RNAplfold, RNAeval, RNAplot, RNAheat
