Two Sequences one Structure

1. Prepare a sequence file (t.seq) for input that looks like this

     >t
     GCGCUUCGCCGCGCGCA&GCGCUUCGCCGCGCGCA
   

2. Compute the MFE and the ensemble properties
3. Look at the generated PostScript files t_ss.ps and t_dp.ps

	  $ RNAcofold -p < t.seq
	  >t
	  GCGCUUCGCCGCGCGCA&GCGCUUCGCCGCGCGCA
	  ((((..((..((((...&))))..))..))))... (-16.90)
	  ((((..{({.(((({{.&))))..})}.))))}}. [-17.23]
	  frequency of mfe structure in ensemble 0.589504 , delta G binding= -3.61