RNAlib-2.2.5
constraints_ligand.h
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1 #ifndef VIENNA_RNA_PACKAGE_LIGAND_H
2 #define VIENNA_RNA_PACKAGE_LIGAND_H
3 
11 
12 
26 int
28  const char *seq,
29  const char *structure,
30  FLT_OR_DBL energy,
31  unsigned int options);
32 
33 int
34 vrna_sc_detect_hi_motif(vrna_fold_compound_t *vc,
35  const char *structure,
36  int *i,
37  int *j,
38  int *k,
39  int *l);
40 
41 int
42 vrna_sc_get_hi_motif( vrna_fold_compound_t *vc,
43  int *i,
44  int *j,
45  int *k,
46  int *l);
47 
48 #endif
double FLT_OR_DBL
Typename for floating point number in partition function computations.
Definition: data_structures.h:44
The most basic data structure required by many functions throughout the RNAlib.
Definition: data_structures.h:397
int vrna_sc_add_hi_motif(vrna_fold_compound_t *vc, const char *seq, const char *structure, FLT_OR_DBL energy, unsigned int options)
Add soft constraints for hairpin or interior loop binding motif.
Various data structures and pre-processor macros.