Deprecated Interface for Local (sliding window) MFE Prediction
Functions
-
float Lfold(const char *string, const char *structure, int maxdist)
- #include <ViennaRNA/Lfold.h>
The local analog to fold().
Computes the minimum free energy structure including only base pairs with a span smaller than ‘maxdist’
- Deprecated:
Use vrna_mfe_window() instead!
-
float Lfoldz(const char *string, const char *structure, int maxdist, int zsc, double min_z)
- #include <ViennaRNA/Lfold.h>
- Deprecated:
Use vrna_mfe_window_zscore() instead!
-
float aliLfold(const char **AS, const char *structure, int maxdist)
- #include <ViennaRNA/Lfold.h>
-
float aliLfold_cb(const char **AS, int maxdist, vrna_mfe_window_f cb, void *data)
- #include <ViennaRNA/Lfold.h>
-
float Lfold(const char *string, const char *structure, int maxdist)