Structured Domains
Add and modify structured domains to the RNA folding grammar.
Introduction
This module provides the tools to add and modify structured domains to the production rules of the RNA folding grammar.
Usually, structured domains represent self-enclosed structural modules that exhibit a more or less complex base pairing pattern. This can be more or less well-defined 3D motifs, such as G-Quadruplexes, or loops with additional non-canonical base pair interactions, such as kink-turns.
Note
Currently, our implementation only provides the specialized case of G-Quadruplexes.