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TBI WORKING PAPERS 2015

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TBI Working Papers are usually works in progress or papers submitted for publication in refereed scientific journals. They contain accounts of the scientific work of the author(s) and do not necessarily represent the views of the TBI.

© NOTICE: All papers are copyrighted by the authors; revised versions that appear in print are copyrighted by the publication in which each appears.
If you would like to use all or a portion of any paper, please contact the author.
Predicting RNA Secondary Structures from Sequence and Probing Data

Author: Ronny Lorenz, Michael T. Wolfinger, Andrea Tanzer, Ivo L. Hofacker
ID: TBI-p-2015-5
Status: submitted
Abstract:         [Abstract]
PDF: [Link to PDF]

forna (force-directed RNA): Simple and Effective Online RNA Secondary Structure Diagrams

Author: Peter Kerpedjiev, Stefan Hammer and Ivo L. Hofacker
ID: TBI-p-2015-1
Status: submitted
Abstract:         [Abstract]
PDF: [Link to PDF]
Supplements: [Link to Supplements]

ViennaNGS: A toolbox for building efficient next- generation sequencing analysis pipelines

Author: Michael T. Wolfinger, Jörg Fallmann, Florian Eggenhofer, Fabian Amman
ID: TBI-p-2015-2
Status: published
Abstract:         [Abstract]
PDF: [Link to PDF]
Link to publication: [F1000 Research]

SHAPE directed RNA folding

Author: Dominik Luntzer, Ronny Lorenz, Ivo L. Hofacker, Peter F. Stadler, Michael T. Wolfinger
ID: TBI-p-2015-3
Status: submitted
Abstract:         [Abstract]
PDF: [Link to PDF]

General and miRNA-mediated mRNA degradation occurs on ribosome complexes in Drosophila cells

Author: Sanja Antic, Michael T. Wolfinger, Anna Skucha, Stefanie Hosiner and Silke Dorner
ID: TBI-p-2015-4
Status: in press
Abstract:         [Abstract]
PDF: No pdf submitted