RNAwolf

The RNAwolf (zu Siederdissen et al., 2011) algorithm provides extended RNA secondary structure predictions. In extended secondary structures, each nucleotide can engage in a pairing with up two other nucleotides. Furthermore the paired edge (Watson-Crick, Sugar, Hoogsteen) for each nucleotide is predicted.

References

2011

  1. journal-article
    A folding algorithm for extended RNA secondary structures
    Christian Höner Siederdissen, Stephan H. Bernhart, Peter F. Stadler, and 1 more author
    Bioinformatics, 2011
    DOI