cvodeSettings Struct Reference

Settings for CVODE Integration. More...

#include <integratorSettings.h>

Data Fields
double	Time
	Time to which model is integrated or if step size if 'Indefinitely' is true.
int	PrintStep
	Number of output steps from 0 to 'Time'; ignored if 'Indefinitely'.
double *	TimePoints
	Optional array of designed time-course.
int	Indefinitely
	if not 0: run without a defined end time, Time field contains step duration, ignore PrintStep field
double	Error
	absolute tolerance in Cvode integration
double	RError
	relative tolerance in Cvode integration
int	Mxstep
	maximum step number for CVode integration
int	CvodeMethod
	set ADAMS-MOULTON (1) or BDF (0) nonlinear solver
int	IterMethod
	set type of nonlinear solver iteration Newton (0) or Functional (1)
int	MaxOrder
	set maximum order of ADAMS or BDF method
int	Sensitivity
	if not 0: use CVODES for sensitivity analysis
int	SensMethod
	set sensitivity analysis method: 0: SIMULTANEOUS, 1: STAGGERED, 2: STAGGERED1
int	HaltOnEvent
	if not 0: Stop integration upon an event
int	SteadyState
	if not 0: Stop integration upon a steady state
int	UseJacobian
	use of Jacobian ASTs (1) or CVODES' internal approximation (0)
int	StoreResults
	if not 0: Store time course history

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Detailed Description

Settings for CVODE Integration.

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Field Documentation

double cvodeSettings::Time

Time to which model is integrated or if step size if 'Indefinitely' is true.

int cvodeSettings::PrintStep

Number of output steps from 0 to 'Time'; ignored if 'Indefinitely'.

double* cvodeSettings::TimePoints

Optional array of designed time-course. If passed by the calling application, Time will be ignored and overruled by TimePoints[Printstep+1], otherwise TimePoints will be calculated from Time and PrintSteps

int cvodeSettings::Indefinitely

if not 0: run without a defined end time, Time field contains step duration, ignore PrintStep field

double cvodeSettings::Error

absolute tolerance in Cvode integration

double cvodeSettings::RError

relative tolerance in Cvode integration

int cvodeSettings::Mxstep

maximum step number for CVode integration

int cvodeSettings::CvodeMethod

set ADAMS-MOULTON (1) or BDF (0) nonlinear solver

int cvodeSettings::IterMethod

set type of nonlinear solver iteration Newton (0) or Functional (1)

int cvodeSettings::MaxOrder

set maximum order of ADAMS or BDF method

int cvodeSettings::Sensitivity

if not 0: use CVODES for sensitivity analysis

int cvodeSettings::SensMethod

set sensitivity analysis method: 0: SIMULTANEOUS, 1: STAGGERED, 2: STAGGERED1

int cvodeSettings::HaltOnEvent

if not 0: Stop integration upon an event

int cvodeSettings::SteadyState

if not 0: Stop integration upon a steady state

int cvodeSettings::UseJacobian

use of Jacobian ASTs (1) or CVODES' internal approximation (0)

int cvodeSettings::StoreResults

if not 0: Store time course history

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The documentation for this struct was generated from the following file:

• src/sbmlsolver/integratorSettings.h

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