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Functions |
| SBML_ODESOLVER_API SBMLResults_t * | SBMLResults_fromIntegrator (Model_t *m, integratorInstance_t *ii) |
| | Maps the integration results from internal data structures back to SBML structures (compartments, species, parameters and reaction fluxes).
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| SBMLResults_t * | SBMLResults_create (Model_t *m, int timepoints) |
| SBML_ODESOLVER_API timeCourse_t * | SBMLResults_getTime (SBMLResults_t *results) |
| | Returns the timeCourse for the integration time points.
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| SBML_ODESOLVER_API int | SBMLResults_getNout (SBMLResults_t *res) |
| | Returns the number of time points, including initial time.
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| SBML_ODESOLVER_API int | SBMLResults_getNumSens (SBMLResults_t *res) |
| | Returns the number of model constants for which sensitivities have been calculated.
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| SBML_ODESOLVER_API const char * | SBMLResults_getSensParam (SBMLResults_t *res, int i) |
| | Returns the name (SBML ID) of the ith constants for which sensitivities have been calculated, where 0 <= i < SBMLResults_getNumSens.
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| SBML_ODESOLVER_API timeCourse_t * | Compartment_getTimeCourse (Compartment_t *c, SBMLResults_t *results) |
| | Returns the timeCourse for a variable (non-constant) compartment.
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| SBML_ODESOLVER_API timeCourse_t * | Species_getTimeCourse (Species_t *s, SBMLResults_t *results) |
| | Returns the timeCourse for a species, whether constant or not.
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| SBML_ODESOLVER_API timeCourse_t * | Parameter_getTimeCourse (Parameter_t *p, SBMLResults_t *results) |
| | Returns the timeCourse for a variable (non-constant) parameters.
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| SBML_ODESOLVER_API timeCourse_t * | SBMLResults_getTimeCourse (SBMLResults_t *results, const char *id) |
| | Returns the timeCourse for a species, variable compartment or parameter or a reaction flux with the corresponding SBML ID.
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| SBML_ODESOLVER_API const char * | TimeCourse_getName (timeCourse_t *tc) |
| | Returns the variable name (SBML ID) of a timeCourse.
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| SBML_ODESOLVER_API int | TimeCourse_getNumValues (timeCourse_t *tc) |
| | Returns the number of timepoints in a timeCourse.
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| SBML_ODESOLVER_API double | TimeCourse_getValue (timeCourse_t *tc, int i) |
| | Returns ith value in a timeCourse, where 0 <= i < TimeCourse_getNumValues.
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| SBML_ODESOLVER_API double | TimeCourse_getSensitivity (timeCourse_t *tc, int i, int j) |
| | Returns the sensitivity to ith constant at jth time step, where 0 <= i < SBMLResults_getNumSens, and 0 <= j < TimeCourse_getNumValues.
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| SBML_ODESOLVER_API void | SBMLResults_free (SBMLResults_t *results) |
| | Frees SBMLResults structure.
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| SBML_ODESOLVER_API void | SBMLResults_dumpSpecies (SBMLResults_t *results) |
| | Prints the timeCourses of all SBML species.
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| SBML_ODESOLVER_API void | SBMLResults_dumpCompartments (SBMLResults_t *results) |
| | Prints the timeCourses of all variable SBML compartments.
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| SBML_ODESOLVER_API void | SBMLResults_dumpParameters (SBMLResults_t *results) |
| | Prints the timeCourses of all variable SBML parameters.
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| SBML_ODESOLVER_API void | SBMLResults_dumpFluxes (SBMLResults_t *results) |
| | Prints the timeCourses of all SBML reaction fluxes.
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| SBML_ODESOLVER_API void | SBMLResults_dump (SBMLResults_t *results) |
| | Prints the timeCourses of all SBML species, of variable compartments and parameters, and of reaction fluxes.
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| SBML_ODESOLVER_API SBMLResults_t * | SBMLResultsMatrix_getResults (SBMLResultsMatrix_t *resM, int i, int j) |
| | Returns the SBMLResults for the jth value of the ith parameter from a parameter variation batch run SBMLResultMatrix.
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| SBML_ODESOLVER_API void | SBMLResultsMatrix_free (SBMLResultsMatrix_t *resM) |
| | Frees the SBMLResultMatrix from a parameter variation batch run.
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| SBMLResultsMatrix_t * | SBMLResultsMatrix_allocate (int nrparams, int nrdesignpoints) |
1.4.4