SBML ODE Solver Library API Modules

Here is a list of all modules:

• Graph Drawing
• Numerical Analysis
  • Integration Results Interface: x(t)
  • ODE/DAE Integrator Interface
    • CVODES ODE Solver: x(t)
      • CVODES Forward Sensitivity: dx(t)/dp
    • IDA DAE Solver: x(t)
    • KINSOL Root Finder: f(x,p,t) = dx/dt = 0
  • Integrator Settings
• Symbolic Analysis
  • ODE Construction: SBML reactions -> SBML rate rules
  • ODE Model: f(x,p,t) = dx/dt
    • Jacobian Matrix: J = df(x)/dx
    • Sensitivity Matrix: P = df(x)/dp
    • Variables + Parameters
  • Formula Processing: f(x), df/dx
    • AST Manipulations
• High Level Interfaces
  • Parameter Variation Settings
  • SBML Results Interface
• SOSlib Error Management

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