Parameter Variation Settings
[High Level Interfaces]

Collaboration diagram for Parameter Variation Settings:

Create the varySettings structure with a series of parameter values used for the batch functions. More...

Functions
SBML_ODESOLVER_API varySettings_t *	VarySettings_allocate (int nrparams, int nrdesignpoints)
	Allocate varySettings structure for settings for parameter variation batch runs: nrparams is the number of parameters to be varied, and nrdesignpoints is the number of values to be tested for each parameter.
SBML_ODESOLVER_API int	VarySettings_addParameter (varySettings_t *vs, char *id, char *rid, double start, double end)
	Add a parameter to the varySettings.
SBML_ODESOLVER_API const char *	VarySettings_getName (varySettings_t *vs, int i)
	Get the name (SBML ID) of the ith parameter,.
SBML_ODESOLVER_API const char *	VarySettings_getReactionName (varySettings_t *vs, int i)
	Get the name (SBML ID) of the reaction of the ith parameter,.
SBML_ODESOLVER_API int	VarySettings_setName (varySettings_t *vs, int i, char *id, char *rid)
	Set the id (SBML ID) of the ith parameter,.
SBML_ODESOLVER_API double	VarySettings_getValue (varySettings_t *vs, int i, int j)
	Get the jth value of the ith parameter,.
SBML_ODESOLVER_API void	VarySettings_setValue (varySettings_t *vs, int i, int j, double value)
	Set the jth value of the ith parameter,.
SBML_ODESOLVER_API void	VarySettings_dump (varySettings_t *vs)
	Print all parameters and their values in varySettings.
SBML_ODESOLVER_API void	VarySettings_free (varySettings_t *vs)
	Frees varySettings structure.
int	VarySettings_addParameterSet (varySettings_t *vs, double **designpoints, char **id, char **rid)

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Detailed Description

Create the varySettings structure with a series of parameter values used for the batch functions.

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Function Documentation

SBML_ODESOLVER_API varySettings_t* VarySettings_allocate (  int  nrparams, int  nrdesignpoints )

Allocate varySettings structure for settings for parameter variation batch runs: nrparams is the number of parameters to be varied, and nrdesignpoints is the number of values to be tested for each parameter.

SBML_ODESOLVER_API int VarySettings_addParameter (  varySettings_t *  vs, char *  id, char *  rid, double  start, double  end )

Add a parameter to the varySettings. For local (reaction/kineticLaw) parameters, the reaction id must be passed as `rid'. For global parameters `rid' must be passed as NULL.

SBML_ODESOLVER_API const char* VarySettings_getName (  varySettings_t *  vs, int  i )

Get the name (SBML ID) of the ith parameter,. where 0 <= i < nrparams as used for varySettings_allocate

SBML_ODESOLVER_API const char* VarySettings_getReactionName (  varySettings_t *  vs, int  i )

Get the name (SBML ID) of the reaction of the ith parameter,. where 0 <= i < nrparams as used for varySettings_allocate. Returns NULL, if the parameter is global.

SBML_ODESOLVER_API int VarySettings_setName (  varySettings_t *  vs, int  i, char *  id, char *  rid )

Set the id (SBML ID) of the ith parameter,. where 0 <= i < nrparams as used for varySettings_allocate. `rid' is the SBML reaction id, if a local parameter shall be varied. For global parameters rid must be passed as NULL.

SBML_ODESOLVER_API double VarySettings_getValue (  varySettings_t *  vs, int  i, int  j )

Get the jth value of the ith parameter,. where 0 <= i < nrparams and 0 <= j < nrdesignpoints as used for varySettings_allocate

SBML_ODESOLVER_API void VarySettings_setValue (  varySettings_t *  vs, int  i, int  j, double  value )

Set the jth value of the ith parameter,. where 0 <= i < nrparams and 0 <= j < nrdesignpoints as used for varySettings_allocate

SBML_ODESOLVER_API void VarySettings_dump (  varySettings_t *  vs  )

Print all parameters and their values in varySettings.

SBML_ODESOLVER_API void VarySettings_free (  varySettings_t *  vs  )

Frees varySettings structure.

int VarySettings_addParameterSet (  varySettings_t *  vs, double **  designpoints, char **  id, char **  rid )

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