interactive.c File Reference

#include <stdio.h>
#include <stdlib.h>
#include <string.h>
#include <math.h>
#include <sbml/SBMLTypes.h>
#include <sbml/util/util.h>
#include "../src/sbmlsolver/odeSolver.h"
#include "interactive.h"
#include "options.h"
#include "commandLine.h"
#include "printModel.h"

Include dependency graph for interactive.c:

Functions
void	interactive ()

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Function Documentation

void interactive (   )

Interactive Mode: Within this while loop the user is asked to choose different actions. The model and the ODEs constructed from the model can be inspected, integrated and the results printed. Also graphs of the reaction network, or the species interactions as specified in the Jacobian matrix can be constructed. The files will be written to the folder from where odeSolver was started. When started the user can type 'h' to see what can be done. NOTE: differences to commandline mode b) Setting alternative initial amounts for species is only possible from the interactive mode. c) Phase Diagrams can only be printed from interactive mode and to XMGrace.

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