Theoretical Biochemistry Group

Institute for Theoretical Chemistry

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Maria Waldl

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RNALands

RNALands (Fast and Efficient Sampling of Structures in RNA Folding Landscapes) is a joint collaborative project on RNA kinetics involving the French Inria groups AMIB and BONSAI, the Université Paris-Sud, and the Austrian TBI. (FWF-I-1804-N28 and ANR-14-CE34-0011)

Prediction of RNA-RNA Interactions

FWF-I-2874 is a shared project of the Bioinformatics Group at Albert-Ludwigs-University in Freiburg (Germany) and the Austrian TBI that focuses on predicting RNA-RNA interactions.

Publications

Kinetics of RNA Structure Formation - Folding Pathways and Evolution
Master's Thesis (2017)
Supervisors: Andrea Tanzer, Ivo Hofacker
Maria Waldl, Markus Oppel and Leticia González
Controlling the Excited-State Dynamics of Nuclear Spin Isomers Using the Dynamic Stark Effect
J. Phys. Chem. A, Article ASAP (2016), doi:10.1021/acs.jpca.5b12542

Talks & Posters

Kinetics of RNA-RNA Interactions
15th Herbstseminar Bioinformatik in Doubice, Czech Republic (2017)
Talk
Maria Waldl, Ronny Lorenz, Ivo Hofacker, Andrea Tanzer, Yann Ponty
Conservation in RNA Folding Trajectories
RNA Retreat in Neuhofen an der Ybbs, Austria (2017)
Poster
Homology in RNA Folding Trajectories
32nd TBI Winterseminar in Bled, Slowenia (2017)
Talk
Data Sets for RNA Kinetics
13th Herbstseminar Bioinformatik in Doubice, Czech Republic (2015)
Talk
Maria Waldl, Markus Oppel, Leticia González
Exploiting the Dynamic Stark Effect to discriminate Nuclear Spin Isomers
50th Symposium on Theoretical Chemistry (2014)
Poster