- r -

• Reaction() : ggl::chem::Reaction
• ReactionRateCalculation() : ggl::chem::ReactionRateCalculation
• ReactionTransitionState() : ggl::chem::ReactionTransitionState
• relabelMolecule() : ggl::chem::AromaticityPerception
• remap() : ggl::chem::MoleculeDecomposition::MC_MC_RingNode , sgm::MC_Edge , sgm::MC_NoEdge , sgm::MC_EdgeLabel , ggl::chem::MC_MC_NodeAdjacency , sgm::MC_Node , sgm::MC_NodeAdjacency , ggl::chem::MC_MC_NodeLabel , sgm::MC_NodeLabel , sgm::Pattern_Interface::Match_Constraint
• remapConstraints() : sgm::SubGraphPattern
• remove_vertex() : sgm::RP_Hanser96
• removeProtons() : ggl::chem::MoleculeUtil
• report_matches() : sgm::VF2_MatchingHandler::VF2_match_handler
• reportComponent() : ggl::chem::MoleculeDecomposition::DecompositionReporter
• reportHit() : ggl::chem::MoleculeDecomposition , ggl::chem::MR_Reactions , ggl::MR_ApplyRule , sgm::Match_Reporter , sgm::MR_Counting , sgm::MR_StoringT< STL_PUSHBACK_CONTAINER > , sgm::MR_StoringInsertT< STL_INSERT_CONTAINER > , sgm::MR_stream , sgm::MR_SymmBreak
• reportInteraction() : ggl::chem::MoleculeDecomposition::DecompositionReporter
• reportMatchComplete() : ggl::chem::MoleculeDecomposition::DecompositionReporter
• reportMatchGraph() : ggl::chem::MoleculeDecomposition::DecompositionReporter
• reportPolyPhosphate() : ggl::chem::MoleculeDecomposition::DecompositionReporter
• reportRing() : ggl::chem::AromaticityPerception , ggl::chem::MoleculeDecomposition , sgm::GraphScaffold::RR_Annotation , sgm::RingReporter , sgm::RP_Hanser96::LoopBondReporter
• reportSmallMolecule() : ggl::chem::MoleculeDecomposition::DecompositionReporter
• reset_data_structures() : ggl::chem::SMILES_grammar::definition< ScannerT > , ggl::Graph_GML_grammar::definition< ScannerT > , ggl::Rule_GML_grammar::definition< ScannerT >
• resetHits() : sgm::MR_stream , sgm::MR_Counting
• RightSidePattern() : ggl::RightSidePattern
• RingDescriptor() : ggl::chem::AromaticityPerception::RingDescriptor , ggl::chem::MoleculeDecomposition::RingDescriptor
• RingFragment() : ggl::chem::MoleculeComponent::RingFragment
• RingPerception() : sgm::RingPerception
• RingReporter() : sgm::RingReporter
• RP_Hanser96() : sgm::RP_Hanser96
• RR_Annotation() : sgm::GraphScaffold::RR_Annotation
• RRC_ArrheniusLaw() : ggl::chem::RRC_ArrheniusLaw
• RRC_Fixed() : ggl::chem::RRC_Fixed
• RRC_TState() : ggl::chem::RRC_TState
• Rule() : ggl::Rule
• Rule_GML_error() : ggl::Rule_GML_error
• Rule_GML_grammar() : ggl::Rule_GML_grammar
• Rule_GML_writer() : ggl::Rule_GML_writer
• RuleCnP() : ggl::Rule::RuleCnP
• RuleSide() : ggl::Rule::RuleSide