Time
Sunday, 12 Feb 2023 - Friday, 17 Feb 2023
Topics
"Computational Biology, Computational Mathematics, Theoretical Biology, Bioinformatics, Biological Networks"
Registration Fee
300,- € (double room) / 400,- € (single room)
Available AV equipment
black board, overhead projector, beamer, laptop (linux) network, internet access via Wlan
Participants
- Institute of Theoretical Chemistry (University of Vienna)
- Department of Bioinformatics (University of Leipzig)
- Chair of Bioinformatics (University of Freiburg)
- Center for non-coding RNA in Technology and Health (RTH) (University of Copenhagen)
- RNA Bioinformatics and High-Throughput Analysis Group (Friedrich Schiller University Jena)
- and guests (by invitation only).
Location(s)
Villa Plemelj
Prešernova 39
4260 Bled, Slovenia
Phone: +386 4 5743 023
GPS Coordinates: 46.371121,14.108504
Prešernova 39
4260 Bled, Slovenia
Phone: +386 4 5743 023
GPS Coordinates: 46.371121,14.108504
How to get there
From Ljubljana airport you have the following options to get to the Winterseminar:
From Ljubljana airport you have the following options to get to the Winterseminar:
- take a regular taxi (approx. 50 €)
- public bus transfer, first to Ljubljana city and from there to Bled
- Airport Shuttle ZUP prevozi (recommended, special rates for groups)
Registration
Registration is closed
In case you have further questions, please send an email to the organizers:
bled (at) viennarna (dot) at
bled (at) viennarna (dot) at
Program
Find the Program calendar here.
Find the pdf version of the Program here.
Arrival and Get Together at the Villa
12 Feb 20235pmVilla Plemlj
Opening Session
13 Feb 202311amHotel Astoria
Session Chair: Ivo Hofacker | ||
---|---|---|
Slides | Speaker | Talk Title |
Ivo Hofacker | Welcome notes and dinner planning |
Computational Biology / RNA Structure
13 Feb 20203pmHotel Astoria
Graph Theory
13 Feb 20208pmHotel Astoria
Phylogeny / Transcriptomics
14 Feb 20233pmHotel Astoria
Graph Theory / Cheminfo
14 Feb 20238pmHotel Astoria
Graph Theory
16 Feb 20233pmHotel Astoria
Bioinformatics
16 Feb 20238pmHotel Astoria
Genomics
17 Feb 202310amHotel Astoria
Further Information
Find detailed information here.
Registered Participants
Number | Name | Affiliation | Talk Title | Payment Status | |
---|---|---|---|---|---|
1 | Christiane | Gärtner | Bioinformatik Uni Leipzig | The impact of methylation patterns in lymphoma on allele-specific expression | |
2 | Christoph | Flamm | TBI Wien | Randomization of chemical reaction networks. | |
3 | Muriel | Ritsch | FSU Jena | tba | |
4 | Daria | Meyer | FSU Jena | tba | |
5 | Nico | Domschke | Bioinformatik Uni Leipzig | TBA | |
6 | Nora | Beier | Bioinformatik Uni Leipzig | Atom Transition Networks for Atom Tracing | |
7 | Christopher | Klapproth | Bioinformatik Uni Leipzig | Svift & STRICT: Annotation of conserved non-coding RNAs (WiP) | |
8 | Emanuel | Barth | FSU Jena | ||
9 | Sigrid | Schwarthoff | Not applicable | ||
10 | Peter | Stadler | Bioinformatik Uni Leipzig | ||
11 | Bärbel | Stadler | Bioinformatik Uni Leipzig | ||
13 | Sarah | Krautwurst | FSU Jena | tba | |
14 | Karl | Kaether | Bioinformatik Uni Leipzig | tba | |
15 | Bruno | Schmidt | MPI MIS Leipzig | tba | |
16 | Jannes | Spangenberg | FSU Jena | Magnipore: Differential single nucleotide changes of ONT signals | |
17 | Kevin | Lamkiewicz | FSU Jena | ||
18 | Stephan | Bernhart | Bioinformatik Uni Leipzig | ||
19 | Maximilian | Feussner | Bioinformatik Uni Leipzig | tba | |
20 | Steve | Hoffmann | FLI Jena | ||
21 | Tycho | Kirchner | FLI Jena | Bashing irreproducibility with shournal | |
22 | Arne | Sahm | FLI Jena | Deciphering the molecular causes of exceptional aging phenomens in the animal kingdom by applying multi-omics | |
23 | Elina | Wiechens | FLI Jena | Promoters revisited | |
24 | Robert | Schwarz | FLI Jena | Locus-specific expression analysis of Transposable Elements | |
25 | Martin | Fischer | FLI Jena | Genome regulation by tumor suppressors and oncoproteins | |
26 | Katjana | Schwab | FLI Jena | ||
27 | Konstantin | Riege | FLI Jena | Bashbone: NGS Bash library | |
28 | Ella | Cassidy | Bioinformatik Uni Leipzig | ||
29 | Sven | Findeiß | Bioinformatik Uni Leipzig | ||
30 | Carmen | Bruckmann | Bioinformatik Uni Leipzig | Automated gating of flow cytometry data | |
31 | Axel | Mosig | Ruhr University Bochum | Theory is Dead! Long Live Theory! | |
34 | Ben Luis | Hack | Ruhr University Bochum | A quartet-based approach to infer phylogenetically informative characters from phenotypic data | |
35 | Wilfried | Imrich | Uni Leoben | Approximate Graph Products | |
36 | Lena | Gladbach | Bioinformatik Uni Leipzig | tba | |
37 | Hua-Ting | Yao | TBI Wien | tba | |
39 | Thomas | Gatter | Bioinformatik Uni Leipzig | Tba | |
40 | Annachiara | Korchmaros | Bioinformatik Uni Leipzig | Quasi Best Match Graphs | |
41 | Sarah | Berkemer | CNRS/Ecole Polytechnique | ||
42 | Marcos | Laffitte | Bioinformatik Uni Leipzig | tba | |
43 | Vivian | Brandenburg | Ruhr University Bochum | A quartet-based approach to infer phylogenetically informative characters from genomic data | |
44 | Yuliia | Varenyk | TBI Wien | The effect of modified nucleotides on secondary structure prediction in tRNA | |
45 | Thomas | Spicher | TBI Wien | Computatonal estmation of energy parameters | |
46 | Josef | Leydold | WU Wien | ||
47 | Nino | Bašić | University of Primorska | Nut graphs are not edge transitive | |
48 | Gabor | Balogh | Bioinformatik Uni Leipzig | tba | |
49 | Ivo | Hofacker | TBI Wien | ||
50 | Mehmet Aziz | Yirik | SDU Odense | CORENET: Complex chemical reaction networks for breakthrough scalable reservoir computing | |
51 | Casper Asbjørn | Eriksen | SDU Odense | TBA | |
52 | Gabriel | Lencioni Lovate | FSU Jena | Differential analysis of RNA cross-linked HTS reads with RNAswarm | |
53 | Jan | Gorodkin | RTH Copenhagen | ||
54 | Carsten R. | Seemann | MPI MIS Leipzig | Nesting of Polygons | |
55 | Tomaž | Pisanski | University of Primorska | On vertex-transitive nut graphs that are not circulant graphs | |
56 | Adrian | Geissler | RTH Copenhagen | Screen for conserved RNA structures in cyanobacteria | |
57 | Akbar | Davoodi | SDU Odense | tba | |
58 | Daniel | Merkle | SDU Odense | TACsy : Training Alliance for Computational Systems Chemistry | |
59 | Franziska | Reinhardt | Bioinformatik Uni Leipzig | Evolution of Neuropeptide Y/RFamide-like receptors in Nematodes | |
60 | Maria | Waldl | TBI Wien | something on rna-rna interaction dynamics | |
61 | Elisa | Israel | Bioinformatik Uni Leipzig | tba | |
63 | Sandhya | Thekkumpadan Puthiyaveedu | Stockholm University | k-Median Graphs | |
64 | Shahram | Saghaei | FSU Jena | VirJenDB: the virus genome database based at FSU Jena | |
65 | Ying | Sun | RTH Copenhagen | Prediction of base editing outcomes by deep learning | |
66 | Cristian | Velandia | TBI Wien | tba |